Basic Information
Locus ID:
jg12472
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the monovalent cation proton antiporter 1 (CPA1) transporter (TC 2.A.36) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 1149470 | 1155856 | + | jg12472 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.95 | 68,182.99 Da | 38.06 | 107.99 | 0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 125 | 533 | 4.5E-56 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 237 | 289 | 3.9E-14 | - |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 206 | 214 | 4.3E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 245 | 255 | 4.3E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 191 | 205 | 4.3E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 177 | 188 | 4.3E-11 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05030.1 | sodium hydrogen exchanger 2. member of Sodium proton exchanger family | 0 |
| RefSeq | XP_011090859.1 | sodium/hydrogen exchanger 1 [Sesamum indicum] | 0 |
| Q56XP4 | Sodium/hydrogen exchanger 2 OS=Arabidopsis thaliana OX=3702 GN=NHX2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6I9UA52 | Sodium/hydrogen exchanger OS=Sesamum indicum OX=4182 GN=LOC105171439 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology