Basic Information
Locus ID:
jg12467
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 1109524 | 1119593 | + | jg12467 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.59 | 33,237.89 Da | 52.05 | 82.58 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 131 | 182 | 1.27E-10 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 134 | 186 | 7.5E-11 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 192 | 233 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 199 | 233 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G54610.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_011090852.1 | probable serine/threonine-protein kinase At1g54610 isoform X1 [Sesamum indicum] | 0 |
| Q9ZVM9 | Probable serine/threonine-protein kinase At1g54610 OS=Arabidopsis thaliana OX=3702 GN=At1g54610 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9TXD0 | probable serine/threonine-protein kinase At1g54610 isoform X1 OS=Sesamum indicum OX=4182 GN=LOC105171433 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 3 | jg12467, jg27989, jg5692 |
| Brassicaceae | Brassica nigra | 1 | BniB03g033180.2N |
| Plantaginaceae | Plantago ovata | 1 | Pov_00035282 |
| Tamaricaceae | Tamarix chinensis | 1 | TC03G2373 |