Basic Information
Locus ID:
jg12461
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
RING finger and CHY zinc finger domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 1065477 | 1067853 | + | jg12461 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.73 | 28,686.87 Da | 61.13 | 76.94 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF161219 | CHY zinc finger-like | 110 | 149 | 7.98E-8 | IPR037274 |
| SUPERFAMILY | SSF161245 | Zinc hairpin stack | 181 | 225 | 2.09E-5 | IPR037275 |
| ProSiteProfiles | PS51270 | Zinc finger CTCHY-type profile. | 174 | 232 | 13.192291 | IPR017921 |
| ProSiteProfiles | PS51266 | Zinc finger CHY-type profile. | 107 | 184 | 13.501776 | IPR008913 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G18650.1 | CHY-type/CTCHY-type/RING-type Zinc finger protein. | 0 |
| RefSeq | XP_010321192.1 | E3 ubiquitin-protein ligase MIEL1 isoform X1 [Solanum lycopersicum] | 0 |
| Q8VZK0 | E3 ubiquitin-protein ligase MIEL1 OS=Arabidopsis thaliana OX=3702 GN=MIEL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2B485 | E3 ubiquitin-protein ligase MIEL1-like OS=Solanum chilense OX=4083 GN=EJD97_018176 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology