Basic Information
Locus ID:
jg12153
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase FAB1D
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr30 | 9934724 | 9944842 | + | jg12153 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.39 | 180,310.61 Da | 45.44 | 77.03 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1282 | 1542 | 1.01027E-128 | IPR044769 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1321 | 1486 | 1.3E-34 | IPR002498 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1490 | 1540 | 3.7E-8 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 199 | 446 | 1.0E-16 | IPR002423 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1267 | 1542 | 1.18E-76 | - |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 261 | 429 | 1.39E-21 | IPR027409 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 260 | 429 | 3.0E-27 | IPR027409 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1267 | 1402 | 1.5E-35 | IPR027484 |
| Gene3D | G3DSA:3.30.810.10 | - | 1404 | 1543 | 8.1E-39 | - |
| SMART | SM00330 | PIPK_2 | 1259 | 1543 | 4.6E-79 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1223 | 1542 | 55.019043 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 83 | 98 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1573 | 1613 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 32 | 108 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 39 | 66 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1575 | 1589 | - | - |
| Coils | Coil | Coil | 911 | 931 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G34260.1 | FORMS APLOID AND BINUCLEATE CELLS 1A. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the porposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_011097420.1 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D [Sesamum indicum] | 0 |
| Q9XID0 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D OS=Arabidopsis thaliana OX=3702 GN=FAB1D PE=3 SV=1 | 0 | |
| TrEMBL | A0A6I9U8Y2 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Sesamum indicum OX=4182 GN=LOC105176346 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology