Basic Information
Locus ID:
jg11851
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr30 | 7459988 | 7471503 | + | jg11851 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.29 | 96,500.53 Da | 38.82 | 84.98 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 587 | 836 | 3.21455E-101 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 663 | 822 | 6.5E-65 | IPR002495 |
| Pfam | PF06487 | Sin3 associated polypeptide p18 (SAP18) | 59 | 179 | 1.4E-35 | IPR010516 |
| Pfam | PF01501 | Glycosyl transferase family 8 | 556 | 658 | 1.0E-6 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 587 | 846 | 5.34E-62 | IPR029044 |
| Gene3D | G3DSA:3.10.20.550 | ASAP complex, SAP18 subunit | 50 | 184 | 4.6E-42 | IPR042534 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 590 | 842 | 2.4E-38 | IPR029044 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 344 | 366 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 32 | 53 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 58 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 19 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61130.1 | galacturonosyltransferase 1. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | XP_011083646.1 | polygalacturonate 4-alpha-galacturonosyltransferase [Sesamum indicum] | 0 |
| Q9LE59 | Polygalacturonate 4-alpha-galacturonosyltransferase OS=Arabidopsis thaliana OX=3702 GN=GAUT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5A7PSC9 | Galacturonosyltransferase 1 OS=Striga asiatica OX=4170 GN=STAS_11821 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology