Basic Information
Locus ID:
jg11758
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Receptor protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr30 | 6663251 | 6666762 | + | jg11758 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.80 | 108,861.85 Da | 34.85 | 104.41 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 699 | 973 | 9.9E-46 | IPR001245 |
| Pfam | PF00560 | Leucine Rich Repeat | 191 | 212 | 0.56 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 23 | 66 | 8.8E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 264 | 323 | 1.8E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 279 | 631 | 1.81E-54 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 73 | 381 | 2.2E-58 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 691 | 973 | 3.51E-73 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 303 | 404 | 2.3E-24 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 674 | 774 | 1.2E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 775 | 980 | 1.7E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 405 | 528 | 3.1E-27 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 188 | 302 | 1.5E-33 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 544 | 627 | 4.9E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 21 | 187 | 3.9E-40 | IPR032675 |
| SMART | SM00220 | serkin_6 | 698 | 973 | 2.1E-30 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 286 | 310 | 65.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 334 | 358 | 51.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 560 | 583 | 330.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 430 | 454 | 52.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 477 | 501 | 38.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 584 | 607 | 82.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 116 | 140 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 141 | 164 | 75.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 698 | 974 | 38.548378 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 819 | 831 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 0 |
| RefSeq | XP_011083584.1 | receptor protein kinase CLAVATA1 [Sesamum indicum] | 0 |
| Q9SYQ8 | Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana OX=3702 GN=CLV1 PE=1 SV=3 | 0 | |
| TrEMBL | A0A6I9THN9 | receptor protein kinase CLAVATA1 OS=Sesamum indicum OX=4182 GN=LOC105166062 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology