Basic Information
Locus ID:
jg11705
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Major Facilitator Superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr30 | 6209165 | 6215704 | - | jg11705 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.80 | 47,225.33 Da | 42.39 | 100.02 | 0.70 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 7 | 414 | 7.87618E-56 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 7 | 374 | 1.7E-27 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 7 | 415 | 3.01E-37 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 4 | 414 | 4.6E-40 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 1 | 420 | 12.462164 | IPR020846 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 53 | 69 | 9.5E-7 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 323 | 343 | 9.5E-7 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 358 | 381 | 9.5E-7 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 298 | 319 | 9.5E-7 | IPR001958 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_011083420.1 | hippocampus abundant transcript 1 protein [Sesamum indicum] | 0 |
| Q96MC6 | Hippocampus abundant transcript 1 protein OS=Homo sapiens OX=9606 GN=MFSD14A PE=1 SV=2 | 0 | |
| TrEMBL | A0A6I9TF39 | hippocampus abundant transcript 1 protein OS=Sesamum indicum OX=4182 GN=LOC105165957 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology