Basic Information
Locus ID:
jg11387
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
CSC1-like protein RXW8
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr30 | 258772 | 269351 | - | jg11387 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.74 | 83,492.40 Da | 43.88 | 101.82 | 0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13967 | Late exocytosis, associated with Golgi transport | 6 | 165 | 7.2E-33 | IPR032880 |
| Pfam | PF02714 | Calcium-dependent channel, 7TM region, putative phosphate | 349 | 620 | 5.9E-68 | IPR003864 |
| Pfam | PF14703 | Cytosolic domain of 10TM putative phosphate transporter | 186 | 338 | 2.1E-19 | IPR027815 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 714 | 740 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G58520.1 | lipases;hydrolases, acting on ester bonds. | 0 |
| RefSeq | XP_012850913.1 | PREDICTED: CSC1-like protein RXW8 [Erythranthe guttata] | 0 |
| F4IBD7 | CSC1-like protein RXW8 OS=Arabidopsis thaliana OX=3702 GN=RXW8 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2G9GT25 | CSC1-like protein RXW8 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_19066 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology