Basic Information
Locus ID:
jg11273
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr21 | 12265491 | 12270540 | + | jg11273 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.55 | 86,757.12 Da | 50.87 | 71.71 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00130 | PAS | 138 | 239 | 1.20463E-11 | IPR000014 |
| CDD | cd13999 | STKc_MAP3K-like | 513 | 759 | 7.34556E-130 | - |
| Pfam | PF00989 | PAS fold | 130 | 237 | 1.4E-11 | IPR013767 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 507 | 759 | 3.6E-70 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 497 | 758 | 4.59E-83 | IPR011009 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 133 | 236 | 2.26E-19 | IPR035965 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 585 | 782 | 4.2E-63 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 139 | 244 | 1.0E-22 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 500 | 584 | 3.4E-31 | - |
| SMART | SM00220 | serkin_6 | 507 | 763 | 5.7E-60 | IPR000719 |
| SMART | SM00091 | pas_2 | 129 | 195 | 1.4E-8 | IPR000014 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 129 | 239 | 3.3E-14 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 507 | 763 | 43.9617 | IPR000719 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 127 | 198 | 15.382689 | IPR000014 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 626 | 638 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 667 | 677 | 1.7E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 686 | 708 | 1.7E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 730 | 752 | 1.7E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 581 | 594 | 1.7E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 620 | 638 | 1.7E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 87 | 101 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 371 | 391 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 297 | 322 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 49 | 65 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 48 | 117 | - | - |
| Coils | Coil | Coil | 19 | 39 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49470.3 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_011100758.1 | probable serine/threonine-protein kinase DDB_G0282963 isoform X2 [Sesamum indicum] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9UN86 | probable serine/threonine-protein kinase DDB_G0282963 isoform X2 OS=Sesamum indicum OX=4182 GN=LOC105178885 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology