Basic Information
Locus ID:
jg11218
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the monovalent cation proton antiporter 1 (CPA1) transporter (TC 2.A.36) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr21 | 11850224 | 11863206 | - | jg11218 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.63 | 96,692.57 Da | 41.27 | 100.21 | 0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 333 | 750 | 1.1E-55 | IPR006153 |
| Pfam | PF00069 | Protein kinase domain | 36 | 97 | 3.9E-8 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 21 | 107 | 6.63E-16 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 47 | 118 | 3.6E-16 | - |
| Gene3D | G3DSA:6.10.140.1330 | - | 453 | 504 | 1.1E-13 | - |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 388 | 399 | 1.0E-10 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 460 | 470 | 1.0E-10 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 402 | 416 | 1.0E-10 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 417 | 425 | 1.0E-10 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05030.1 | sodium hydrogen exchanger 2. member of Sodium proton exchanger family | 0 |
| RefSeq | XP_011090859.1 | sodium/hydrogen exchanger 1 [Sesamum indicum] | 0 |
| Q56XP4 | Sodium/hydrogen exchanger 2 OS=Arabidopsis thaliana OX=3702 GN=NHX2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6I9UA52 | Sodium/hydrogen exchanger OS=Sesamum indicum OX=4182 GN=LOC105171439 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology