Basic Information
Locus ID:
jg10935
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Inositol polyphosphate phosphatase, catalytic domain homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr21 | 4777457 | 4784253 | + | jg10935 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.28 | 129,756.34 Da | 41.15 | 79.66 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09074 | INPP5c | 592 | 938 | 3.10584E-111 | - |
| Pfam | PF03372 | Endonuclease/Exonuclease/phosphatase family | 597 | 929 | 6.7E-17 | IPR005135 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 181 | 575 | 1.46E-25 | IPR036322 |
| SUPERFAMILY | SSF56219 | DNase I-like | 570 | 960 | 2.64E-61 | IPR036691 |
| Gene3D | G3DSA:2.130.10.10 | - | 445 | 573 | 7.5E-6 | IPR015943 |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 574 | 971 | 4.5E-104 | IPR036691 |
| Gene3D | G3DSA:2.130.10.10 | - | 162 | 409 | 4.1E-12 | IPR015943 |
| SMART | SM00320 | WD40_4 | 213 | 251 | 9.1 | IPR001680 |
| SMART | SM00320 | WD40_4 | 448 | 486 | 340.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 527 | 564 | 180.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 488 | 525 | 32.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 261 | 299 | 0.038 | IPR001680 |
| SMART | SM00128 | i5p_5 | 590 | 944 | 6.5E-89 | IPR000300 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 74 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 66 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 36 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G43900.1 | Endonuclease/exonuclease/phosphatase family protein. | 0 |
| RefSeq | XP_011074003.1 | type I inositol polyphosphate 5-phosphatase 12 isoform X2 [Sesamum indicum] | 0 |
| O80560 | Type I inositol polyphosphate 5-phosphatase 12 OS=Arabidopsis thaliana OX=3702 GN=IP5P12 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6I9STQ0 | type I inositol polyphosphate 5-phosphatase 12 isoform X2 OS=Sesamum indicum OX=4182 GN=LOC105158820 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology