Basic Information
Locus ID:
jg10582
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr21 | 1285592 | 1288105 | + | jg10582 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.10 | 72,176.52 Da | 38.51 | 71.61 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 52 | 181 | 1.6763E-45 | IPR033734 |
| CDD | cd09612 | Jacalin | 506 | 635 | 1.52987E-41 | IPR033734 |
| CDD | cd09612 | Jacalin | 288 | 418 | 7.0593E-37 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 503 | 635 | 5.6E-32 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 54 | 183 | 5.4E-31 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 288 | 418 | 4.6E-28 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 494 | 634 | 1.15E-42 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 277 | 418 | 1.14E-38 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 42 | 183 | 2.75E-41 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 29 | 181 | 2.9E-52 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 482 | 635 | 2.5E-53 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 266 | 419 | 3.6E-49 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 503 | 636 | 1.0E-42 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 52 | 183 | 1.3E-40 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 288 | 420 | 1.8E-36 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 41 | 183 | 48.066341 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 277 | 420 | 47.888134 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 492 | 636 | 50.626862 | IPR001229 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 438 | 458 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.1 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_051150764.1 | jacalin-related lectin 3 isoform X3 [Andrographis paniculata] | 0 |
| F4HQX1 | Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9SVL1 | jacalin-related lectin 3 OS=Sesamum indicum OX=4182 GN=LOC105159309 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology