Basic Information
Locus ID:
jg1050
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 1814575 | 1828437 | + | jg1050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.06 | 337,544.97 Da | 49.81 | 89.64 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 259 | 590 | 2.4E-109 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 253 | 622 | 1.84E-117 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 248 | 601 | 1.1E-133 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 251 | 598 | 1.9E-161 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 253 | 590 | 117.363098 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 486 | 497 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 487 | 505 | 4.6E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 325 | 346 | 4.6E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 454 | 471 | 4.6E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 540 | 561 | 4.6E-40 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2576 | 2601 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 39 | 123 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2577 | 2601 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 142 | 190 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 46 | 71 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 142 | 191 | - | - |
| Coils | Coil | Coil | 604 | 624 | - | - |
| Coils | Coil | Coil | 2550 | 2577 | - | - |
| Coils | Coil | Coil | 1127 | 1147 | - | - |
| Coils | Coil | Coil | 2845 | 2865 | - | - |
| Coils | Coil | Coil | 2350 | 2391 | - | - |
| Coils | Coil | Coil | 1081 | 1101 | - | - |
| Coils | Coil | Coil | 691 | 718 | - | - |
| Coils | Coil | Coil | 2427 | 2503 | - | - |
| Coils | Coil | Coil | 1176 | 1196 | - | - |
| Coils | Coil | Coil | 2724 | 2747 | - | - |
| Coils | Coil | Coil | 861 | 888 | - | - |
| Coils | Coil | Coil | 2617 | 2651 | - | - |
| Coils | Coil | Coil | 2104 | 2124 | - | - |
| Coils | Coil | Coil | 2755 | 2782 | - | - |
| Coils | Coil | Coil | 1384 | 1432 | - | - |
| Coils | Coil | Coil | 1625 | 1645 | - | - |
| Coils | Coil | Coil | 2685 | 2719 | - | - |
| Coils | Coil | Coil | 965 | 985 | - | - |
| Coils | Coil | Coil | 2003 | 2023 | - | - |
| Coils | Coil | Coil | 1533 | 1560 | - | - |
| Coils | Coil | Coil | 2895 | 2915 | - | - |
| Coils | Coil | Coil | 2263 | 2290 | - | - |
| Coils | Coil | Coil | 1667 | 1708 | - | - |
| Coils | Coil | Coil | 2792 | 2833 | - | - |
| Coils | Coil | Coil | 2511 | 2538 | - | - |
| Coils | Coil | Coil | 1000 | 1055 | - | - |
| Coils | Coil | Coil | 2146 | 2166 | - | - |
| Coils | Coil | Coil | 2062 | 2089 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19050.1 | phragmoplast orienting kinesin 2. PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. | 0 |
| RefSeq | XP_011088306.1 | kinesin-like protein KIN-12D [Sesamum indicum] | 0 |
| Q27IK6 | Kinesin-like protein KIN-12D OS=Arabidopsis thaliana OX=3702 GN=KIN12D PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9TRG2 | kinesin-like protein KIN-12D OS=Sesamum indicum OX=4182 GN=LOC105169579 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology