Basic Information
Locus ID:
jg10119
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 13427519 | 13430777 | + | jg10119 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.16 | 108,943.71 Da | 28.71 | 99.76 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 44 | 87 | 4.7E-9 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 285 | 303 | 87.0 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 523 | 580 | 7.4E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 93 | 149 | 2.7E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 721 | 989 | 7.4E-50 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 333 | 391 | 2.8E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 188 | 246 | 2.6E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 721 | 995 | 4.32E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 78 | 396 | 1.12E-63 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 271 | 616 | 3.22E-64 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 685 | 795 | 9.0E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 380 | 643 | 1.2E-74 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 305 | 379 | 4.5E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 195 | 304 | 6.0E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 46 | 194 | 8.3E-39 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 796 | 1000 | 1.2E-58 | - |
| SMART | SM00369 | LRR_typ_2 | 354 | 378 | 26.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 717 | 992 | 3.5E-35 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 138 | 162 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 210 | 233 | 17.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 258 | 282 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 306 | 329 | 19.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 717 | 992 | 38.873459 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 843 | 855 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 723 | 746 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61480.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_011076386.1 | leucine-rich repeat receptor-like protein kinase TDR [Sesamum indicum] | 0 |
| Q9FII5 | Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana OX=3702 GN=TDR PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9T0P6 | leucine-rich repeat receptor-like protein kinase TDR OS=Sesamum indicum OX=4182 GN=LOC105160618 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology