Basic Information
Locus ID:
jg10118
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 13410360 | 13413959 | + | jg10118 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.12 | 105,426.60 Da | 32.98 | 97.50 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 115 | 128 | 1.5 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 379 | 399 | 1.6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 522 | 579 | 3.6E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 297 | 342 | 1.6E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 186 | 244 | 5.9E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 721 | 811 | 1.4E-14 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 829 | 941 | 5.9E-8 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 43 | 86 | 1.3E-9 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 284 | 302 | 5.9 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 722 | 946 | 1.52E-43 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 90 | 396 | 3.3E-61 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 322 | 631 | 5.36E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 195 | 254 | 2.4E-13 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 44 | 193 | 2.1E-39 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 335 | 645 | 7.1E-86 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 705 | 832 | 4.5E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 255 | 334 | 1.2E-22 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 833 | 956 | 1.9E-26 | - |
| SMART | SM00369 | LRR_typ_2 | 449 | 473 | 47.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 353 | 377 | 70.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 568 | 591 | 67.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 209 | 232 | 30.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 257 | 281 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 185 | 208 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 305 | 329 | 9.2 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 137 | 161 | 5.9 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 718 | 978 | 12.358076 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 724 | 747 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 308 | 321 | 8.5E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 449 | 462 | 8.5E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61480.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_011076386.1 | leucine-rich repeat receptor-like protein kinase TDR [Sesamum indicum] | 0 |
| Q9FII5 | Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana OX=3702 GN=TDR PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9T0P6 | leucine-rich repeat receptor-like protein kinase TDR OS=Sesamum indicum OX=4182 GN=LOC105160618 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology