Basic Information
Locus ID:
jg10023
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
serine threonine-protein kinase-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 12585338 | 12587770 | - | jg10023 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.39 | 87,614.27 Da | 46.10 | 83.23 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13540 | Regulator of chromosome condensation (RCC1) repeat | 168 | 192 | 5.9E-5 | - |
| Pfam | PF13540 | Regulator of chromosome condensation (RCC1) repeat | 248 | 273 | 8.2E-5 | - |
| Pfam | PF00069 | Protein kinase domain | 502 | 784 | 1.2E-43 | IPR000719 |
| Pfam | PF13540 | Regulator of chromosome condensation (RCC1) repeat | 209 | 235 | 1.2E-5 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 481 | 787 | 2.16E-72 | IPR011009 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 42 | 275 | 7.46E-22 | IPR009091 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 464 | 581 | 1.7E-32 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 22 | 199 | 2.2E-7 | IPR009091 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 582 | 801 | 1.5E-50 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 200 | 355 | 2.1E-21 | IPR009091 |
| SMART | SM00220 | serkin_6 | 501 | 790 | 4.0E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 501 | 764 | 36.004257 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 632 | 644 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 507 | 539 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 431 | 484 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 431 | 477 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G55950.1 | CRINKLY4 related 3. | 0 |
| RefSeq | XP_011084907.1 | putative serine/threonine-protein kinase-like protein CCR3 [Sesamum indicum] | 0 |
| Q9LY50 | Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana OX=3702 GN=CCR3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9THE7 | putative serine/threonine-protein kinase-like protein CCR3 OS=Sesamum indicum OX=4182 GN=LOC105167048 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology