Basic Information
Locus ID:
gene_9918
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_8_Chr_3 | 33210563 | 33218809 | - | gene_9918 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.32 | 105,908.51 Da | 39.61 | 89.61 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 638 | 905 | 5.92985E-98 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 636 | 901 | 1.0E-47 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 64 | 3.9E-7 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 23 | 301 | 1.14E-47 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 284 | 399 | 2.61E-10 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 617 | 913 | 1.48E-79 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 187 | 6.5E-40 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 606 | 707 | 1.7E-37 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 708 | 925 | 8.2E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 188 | 393 | 3.5E-36 | IPR032675 |
| SMART | SM00220 | serkin_6 | 632 | 905 | 5.6E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 632 | 906 | 38.732121 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 638 | 660 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 752 | 764 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021730398.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 isoform X1 [Chenopodium quinoa] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M1G4 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology