Basic Information
Locus ID:
gene_9831
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Eukaryotic translation initiation factor eIF2A
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 56195106 | 56208884 | + | gene_9831 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.35 | 57,669.07 Da | 48.60 | 75.85 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 342 | 382 | 0.0014 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 302 | 337 | 8.1E-6 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 168 | 504 | 4.03E-56 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 126 | 457 | 2.0E-114 | IPR015943 |
| SMART | SM00320 | WD40_4 | 170 | 211 | 130.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 340 | 382 | 4.9E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 257 | 294 | 1.2 | IPR001680 |
| SMART | SM00320 | WD40_4 | 385 | 425 | 320.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 428 | 503 | 0.17 | IPR001680 |
| SMART | SM00320 | WD40_4 | 298 | 337 | 4.1E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 214 | 254 | 1.1 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 305 | 337 | 11.681953 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 347 | 391 | 8.703868 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 305 | 346 | 14.852817 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 369 | 383 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 13 | 58 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 58 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G13840.1 | FIZZY-related 3. | 0 |
| RefSeq | XP_012454936.1 | protein FIZZY-RELATED 3 isoform X1 [Gossypium raimondii] | 0 |
| A0A396ISC0 | B-type cell cycle switch protein ccs52B OS=Medicago truncatula OX=3880 GN=CCS52B PE=2 SV=1 | 0 | |
| TrEMBL | A0A7J9F6M5 | Protein FIZZY-RELATED 3 OS=Gossypium trilobum OX=34281 GN=Gotri_004884 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology