Basic Information
Locus ID:
gene_9723
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 15666832 | 15673811 | + | gene_9723 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.18 | 21,979.22 Da | 30.57 | 79.03 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 25 | 152 | 2.13803E-51 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 27 | 151 | 2.7E-39 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 28 | 158 | 1.79E-45 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 21 | 169 | 1.5E-47 | IPR016135 |
| SMART | SM00212 | ubc_7 | 19 | 157 | 8.4E-48 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 1 | 157 | 40.003162 | IPR000608 |
| ProSitePatterns | PS00183 | Ubiquitin-conjugating (UBC) active site signature. | 82 | 98 | - | IPR023313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 156 | 196 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 178 | 196 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G41340.1 | ubiquitin conjugating enzyme 4. Belongs to Ubiquitin conjugating enzyme family. Gene expression is developmentally regulated. | 0 |
| RefSeq | XP_042498181.1 | ubiquitin-conjugating enzyme E2-23 kDa-like [Macadamia integrifolia] | 0 |
| P42748 | Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana OX=3702 GN=UBC4 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J5AI51 | UBC core domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_004969 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology