Basic Information
Locus ID:
gene_9700
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 10784661 | 10792283 | + | gene_9700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 70,345.12 Da | 42.61 | 90.89 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03000 | NPH3 family | 216 | 481 | 1.7E-96 | IPR027356 |
| Pfam | PF00651 | BTB/POZ domain | 29 | 117 | 1.5E-6 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 22 | 117 | 6.12E-15 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 18 | 136 | 1.3E-11 | IPR011333 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 216 | 505 | 94.091072 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 30 | 100 | 10.819732 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 603 | 632 | - | - |
| Coils | Coil | Coil | 545 | 579 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G30440.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_015881141.2 | BTB/POZ domain-containing protein At1g30440 [Ziziphus jujuba var. spinosa] | 0 |
| Q9S9Q9 | BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana OX=3702 GN=At1g30440 PE=1 SV=2 | 0 | |
| TrEMBL | I7BX44 | BZIP6 OS=Tamarix hispida OX=189793 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology