Basic Information
Locus ID:
gene_9562
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Short Name:
CAX2
Description:
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_8_Chr_3 | 18829949 | 18842892 | - | gene_9562 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.29 | 51,950.10 Da | 34.62 | 110.91 | 0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01699 | Sodium/calcium exchanger protein | 319 | 457 | 1.2E-19 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 127 | 282 | 3.8E-21 | IPR004837 |
| Gene3D | G3DSA:1.20.1420.30 | - | 156 | 291 | 1.8E-15 | IPR044880 |
| Gene3D | G3DSA:1.20.1420.30 | - | 304 | 461 | 1.4E-18 | IPR044880 |
| TIGRFAM | TIGR00378 | cax: calcium/proton exchanger | 108 | 460 | 5.1E-103 | IPR004798 |
| TIGRFAM | TIGR00846 | caca2: calcium/proton exchanger | 95 | 460 | 1.5E-117 | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55730.1 | cation exchanger 5. member of Low affinity calcium antiporter CAX2 family | 0 |
| RefSeq | XP_010687286.1 | vacuolar cation/proton exchanger 2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q5KQN0 | Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CAX2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9RDD6 | Vacuolar cation/proton exchanger OS=Spinacia oleracea OX=3562 GN=SOVF_079600 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology