Basic Information
Locus ID:
gene_9092
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
proteinaceous RNase P 1, chloroplastic mitochondrial-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_8_Chr_3 | 3274221 | 3281866 | - | gene_9092 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.80 | 96,499.15 Da | 46.15 | 72.12 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 230 | 289 | 2.1E-17 | IPR033443 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 353 | 499 | 7.9E-55 | IPR033443 |
| Pfam | PF16953 | Protein-only RNase P | 541 | 766 | 4.6E-74 | IPR031595 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 351 | 769 | 7.6E-196 | IPR011990 |
| Gene3D | G3DSA:3.40.50.11980 | - | 558 | 732 | 7.6E-196 | - |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 412 | 446 | 8.736214 | IPR002885 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 196 | 213 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 119 | 150 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 298 | 338 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 122 | 146 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 785 | 827 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 812 | 827 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 312 | 333 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 172 | 235 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 214 | 235 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 0 |
| RefSeq | XP_010688233.1 | uncharacterized protein LOC104902231 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RZA4 | ribonuclease P OS=Spinacia oleracea OX=3562 GN=SOVF_011940 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology