Basic Information
Locus ID:
gene_9063
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 23082581 | 23102845 | + | gene_9063 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.80 | 199,141.25 Da | 50.06 | 77.32 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 380 | 652 | 7.94631E-133 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1509 | 1772 | 7.03109E-147 | IPR044769 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1548 | 1714 | 2.3E-33 | IPR002498 |
| Pfam | PF01363 | FYVE zinc finger | 33 | 102 | 5.0E-16 | IPR000306 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 401 | 648 | 2.9E-34 | IPR002423 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 31 | 102 | 1.77E-17 | IPR011011 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1484 | 1772 | 1.83E-80 | - |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 446 | 618 | 2.07E-43 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1631 | 1773 | 1.3E-40 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1482 | 1629 | 6.2E-38 | IPR027484 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 445 | 618 | 1.1E-55 | IPR027409 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 23 | 107 | 8.3E-20 | IPR013083 |
| SMART | SM00330 | PIPK_2 | 1486 | 1773 | 2.1E-122 | IPR002498 |
| SMART | SM00064 | fyve_4 | 28 | 103 | 6.9E-18 | IPR000306 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 36 | 102 | 12.627228 | IPR017455 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1452 | 1772 | 58.064495 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 207 | 225 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 168 | 225 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 727 | 747 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 811 | 836 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 183 | 206 | - | - |
| Coils | Coil | Coil | 1072 | 1099 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14270.1 | phosphatidylinositol-4-phosphate 5-kinase family protein. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. | 0 |
| RefSeq | XP_010273819.1 | PREDICTED: 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B [Nelumbo nucifera] | 0 |
| Q9LUM0 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=1 SV=1 | 0 | |
| TrEMBL | A0A1U8B3F2 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Nelumbo nucifera OX=4432 GN=LOC104609260 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology