Basic Information
Locus ID:
gene_9033
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Glyco_18
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 21000173 | 21001985 | + | gene_9033 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.49 | 40,390.24 Da | 30.97 | 80.43 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02879 | GH18_plant_chitinase_class_V | 25 | 361 | 9.99043E-143 | - |
| Pfam | PF00704 | Glycosyl hydrolases family 18 | 30 | 355 | 1.2E-79 | IPR001223 |
| SUPERFAMILY | SSF54556 | Chitinase insertion domain | 258 | 326 | 3.93E-14 | IPR029070 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 30 | 358 | 3.55E-66 | IPR017853 |
| Gene3D | G3DSA:3.10.50.10 | - | 257 | 326 | 6.6E-106 | IPR029070 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 43 | 355 | 6.6E-106 | - |
| SMART | SM00636 | 2g34 | 27 | 355 | 4.3E-101 | IPR011583 |
| ProSiteProfiles | PS51910 | Glycosyl hydrolases family 18 (GH18) domain profile. | 27 | 370 | 70.864441 | IPR001223 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19810.1 | Glycosyl hydrolase family protein with chitinase insertion domain. | 0 |
| RefSeq | XP_052200537.1 | class V chitinase-like [Diospyros lotus] | 0 |
| O81862 | Class V chitinase OS=Arabidopsis thaliana OX=3702 GN=ChiC PE=1 SV=1 | 0 | |
| TrEMBL | A0A834HH00 | GH18 domain-containing protein OS=Rhododendron simsii OX=118357 GN=RHSIM_Rhsim01G0042600 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology