Basic Information
Locus ID:
gene_8971
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 15958624 | 15961390 | + | gene_8971 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.38 | 68,918.89 Da | 48.92 | 105.10 | 0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 52 | 92 | 7.1E-9 | IPR001810 |
| Pfam | PF13516 | Leucine Rich repeat | 549 | 570 | 0.028 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 254 | 276 | 1.9 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 523 | 545 | 1.8 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 202 | 225 | 0.052 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 284 | 631 | 6.67E-27 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 42 | 89 | 7.06E-10 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 162 | 404 | 4.97E-33 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 242 | 439 | 1.3E-27 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 121 | 241 | 1.8E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 440 | 518 | 8.8E-8 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 519 | 633 | 1.6E-13 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 46 | 92 | 9.7E-7 | - |
| SMART | SM00367 | LRR_CC_2 | 335 | 360 | 82.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 361 | 386 | 56.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 495 | 520 | 25.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 522 | 547 | 0.041 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 202 | 227 | 8.7E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 176 | 201 | 120.0 | IPR006553 |
| SMART | SM00256 | fbox_2 | 56 | 96 | 7.1E-5 | IPR001810 |
| SMART | SM00367 | LRR_CC_2 | 548 | 572 | 19.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 228 | 253 | 1.4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 468 | 493 | 0.92 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 254 | 279 | 0.0012 | IPR006553 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 50 | 98 | 9.68293 | IPR001810 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_050271939.1 | EIN3-binding F-box protein 1-like [Quercus robur] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2N9GH54 | F-box domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26747 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology