Basic Information
Locus ID:
gene_8961
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Ubiquitin system component Cue protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_8_Chr_3 | 1251023 | 1255802 | - | gene_8961 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.46 | 30,151.41 Da | 54.20 | 82.26 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14279 | CUE | 50 | 84 | 2.28016E-6 | - |
| Pfam | PF02845 | CUE domain | 51 | 84 | 1.1E-6 | IPR003892 |
| SUPERFAMILY | SSF46934 | UBA-like | 51 | 89 | 1.53E-6 | IPR009060 |
| Gene3D | G3DSA:1.10.8.10 | - | 50 | 89 | 7.8E-6 | - |
| ProSiteProfiles | PS51140 | CUE domain profile. | 46 | 89 | 12.172319 | IPR003892 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 102 | 128 | - | - |
| Coils | Coil | Coil | 183 | 203 | - | - |
| Coils | Coil | Coil | 221 | 248 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G32440.1 | Ubiquitin system component Cue protein. | 0 |
| RefSeq | XP_010687928.1 | uncharacterized protein LOC104901986 isoform X4 [Beta vulgaris subsp. vulgaris] | 0 |
| TrEMBL | A0A0K9QJZ2 | CUE domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_170460 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology