Basic Information
Locus ID:
gene_8780
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
F-box LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_18_Chr_7N | 5078167 | 5080815 | + | gene_8780 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.48 | 29,384.04 Da | 29.95 | 75.72 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_030531118.1 | F-box/LRR-repeat protein At5g63520 isoform X1 [Rhodamnia argentea] | 0 |
| TrEMBL | A0A8B8PAV2 | F-box/LRR-repeat protein At5g63520 isoform X3 OS=Rhodamnia argentea OX=178133 GN=LOC115741392 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_14095, gene_8780 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah036449 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg39519 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg14814 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00016872 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl12725, Sgl17967 |