Basic Information
Locus ID:
gene_8739
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_18_Chr_7N | 3787087 | 3791990 | + | gene_8739 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.61 | 108,666.79 Da | 31.60 | 103.96 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 698 | 971 | 5.2E-42 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 245 | 267 | 0.8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 24 | 71 | 4.1E-7 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 309 | 625 | 4.76E-52 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 690 | 973 | 7.69E-72 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 78 | 401 | 1.1E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 664 | 771 | 8.8E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 140 | 1.4E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 333 | 628 | 2.5E-80 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 141 | 229 | 1.6E-25 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 772 | 987 | 4.7E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 230 | 328 | 2.8E-26 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 482 | 506 | 34.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 697 | 978 | 1.2E-28 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 194 | 218 | 41.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 411 | 435 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 267 | 291 | 38.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 339 | 363 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 121 | 144 | 220.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 697 | 974 | 37.276318 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 816 | 828 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 0 |
| RefSeq | XP_021755306.1 | receptor protein kinase CLAVATA1-like [Chenopodium quinoa] | 0 |
| Q9SYQ8 | Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana OX=3702 GN=CLV1 PE=1 SV=3 | 0 | |
| TrEMBL | A0A803N6X2 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology