Basic Information
Locus ID:
gene_8737
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Myosin heavy chain kinase B-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_18_Chr_7N | 3725413 | 3732176 | + | gene_8737 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.55 | 56,681.75 Da | 49.38 | 76.02 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 362 | 392 | 0.0071 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 405 | 449 | 0.029 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 225 | 257 | 0.2 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 261 | 298 | 0.0032 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 97 | 452 | 1.01E-48 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 214 | 471 | 1.2E-40 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 82 | 213 | 2.9E-9 | IPR015943 |
| SMART | SM00320 | WD40_4 | 356 | 393 | 0.061 | IPR001680 |
| SMART | SM00320 | WD40_4 | 260 | 299 | 1.4E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 136 | 174 | 0.79 | IPR001680 |
| SMART | SM00320 | WD40_4 | 306 | 349 | 0.8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 218 | 257 | 0.0071 | IPR001680 |
| SMART | SM00320 | WD40_4 | 93 | 133 | 0.92 | IPR001680 |
| SMART | SM00320 | WD40_4 | 403 | 450 | 1.2 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 363 | 392 | 10.074014 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 225 | 266 | 11.009724 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 267 | 298 | 9.625601 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 267 | 298 | 11.510997 | IPR001680 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 161 | 175 | 2.4E-5 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 244 | 258 | 2.4E-5 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 380 | 394 | 2.4E-5 | IPR020472 |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04120 (Ubiquitin mediated proteolysis)
map04120 (Ubiquitin mediated proteolysis)
ko04218 (Cellular senescence)
map04218 (Cellular senescence)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04340 (Hedgehog signaling pathway)
map04340 (Hedgehog signaling pathway)
ko04341 (Hedgehog signaling pathway - fly)
map04341 (Hedgehog signaling pathway - fly)
ko04390 (Hippo signaling pathway)
map04390 (Hippo signaling pathway)
ko04624 (Toll and Imd signaling pathway)
map04624 (Toll and Imd signaling pathway)
ko04710 (Circadian rhythm)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G24130.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_010668294.2 | protein JINGUBANG [Beta vulgaris subsp. vulgaris] | 0 |
| O48716 | Protein JINGUBANG OS=Arabidopsis thaliana OX=3702 GN=JGB PE=1 SV=1 | 0 | |
| TrEMBL | A0A6P6TQJ4 | protein JINGUBANG-like OS=Coffea arabica OX=13443 GN=LOC113703536 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology