Basic Information
Locus ID:
gene_8592
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 97845153 | 97851262 | - | gene_8592 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.75 | 93,374.58 Da | 58.45 | 65.48 | -0.89 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16647 | mRING-HC-C3HC5_NEU1 | 777 | 816 | 2.66059E-18 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 775 | 821 | 2.0E-10 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 768 | 822 | 2.04E-7 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 757 | 827 | 2.5E-12 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 777 | 816 | 10.261575 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 73 | 88 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 117 | 139 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 508 | 543 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 366 | 387 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 109 | 139 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 521 | 543 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 655 | 674 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 39 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 62 | 88 | - | - |
| Coils | Coil | Coil | 705 | 732 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G27950.1 | Ring/U-Box superfamily protein. | 0 |
| RefSeq | XP_021732900.1 | uncharacterized protein LOC110699684 [Chenopodium quinoa] | 0 |
| A8MQ27 | E3 ubiquitin-protein ligase NEURL1B OS=Homo sapiens OX=9606 GN=NEURL1B PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9AXV2 | RING-type domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology