Basic Information
Locus ID:
gene_8564
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
CSC1-like protein RXW8
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_18_Chr_7N | 8531740 | 8549953 | - | gene_8564 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.92 | 80,759.30 Da | 56.20 | 96.65 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14703 | Cytosolic domain of 10TM putative phosphate transporter | 142 | 293 | 5.2E-23 | IPR027815 |
| Pfam | PF02714 | Calcium-dependent channel, 7TM region, putative phosphate | 304 | 572 | 9.0E-70 | IPR003864 |
| Pfam | PF13967 | Late exocytosis, associated with Golgi transport | 17 | 121 | 1.5E-26 | IPR032880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 667 | 704 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G58520.1 | lipases;hydrolases, acting on ester bonds. | 0 |
| RefSeq | XP_021730373.1 | CSC1-like protein RXW8 isoform X2 [Chenopodium quinoa] | 0 |
| F4IBD7 | CSC1-like protein RXW8 OS=Arabidopsis thaliana OX=3702 GN=RXW8 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803N2A2 | CSC1-like protein RXW8 OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology