Basic Information
Locus ID:
gene_8412
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_18_Chr_7N | 2763963 | 2764975 | - | gene_8412 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.65 | 28,076.43 Da | 42.99 | 78.80 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 145 | 257 | 2.1E-12 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 28 | 126 | 2.0E-7 | IPR002902 |
| Gene3D | G3DSA:3.30.430.20 | - | 138 | 259 | 9.1E-20 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 21 | 132 | 1.7E-12 | IPR038408 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 22 | 132 | 14.732742 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 138 | 259 | 15.565536 | IPR002902 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021756549.1 | cysteine-rich receptor-like protein kinase 27 isoform X2 [Chenopodium quinoa] | 0 |
| Q9LRL2 | Putative cysteine-rich repeat secretory protein 25 OS=Arabidopsis thaliana OX=3702 GN=CRRSP25 PE=5 SV=2 | 0 | |
| TrEMBL | A0A803LIS2 | Cysteine-rich receptor-like protein kinase 25 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 3 | gene_8411, gene_8412, gene_8413 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg39968, Sbi_jg55298 |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg14367, Seu_jg14368 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000035541, gene:ENSEOMG00000049013 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.1AG0022010, CQ.Regalona.r1.1AG0022030 |