Basic Information
Locus ID:
gene_8191
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_12_Chr_6 | 36429957 | 36447053 | - | gene_8191 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.47 | 96,582.29 Da | 47.93 | 62.45 | -0.89 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 645 | 684 | 5.64E-7 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 46 | 243 | 3.13E-8 | IPR016024 |
| Gene3D | G3DSA:2.30.30.140 | - | 637 | 694 | 3.4E-11 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 593 | 635 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 699 | 739 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 464 | 585 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 699 | 873 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 758 | 826 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 294 | 648 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 258 | 280 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 305 | 326 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 350 | 364 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 327 | 349 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 381 | 439 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.2 | 0 | |
| RefSeq | XP_021769435.1 | ABC transporter F family member 4-like [Chenopodium quinoa] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9AN04 | Tudor domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology