Basic Information
Locus ID:
gene_8128
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_12_Chr_6 | 35283762 | 35291683 | - | gene_8128 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.21 | 111,619.54 Da | 31.86 | 97.10 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 689 | 968 | 2.7257E-92 | - |
| Pfam | PF00069 | Protein kinase domain | 685 | 966 | 1.4E-46 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 279 | 584 | 2.55E-48 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 674 | 968 | 1.03E-72 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 27 | 368 | 2.31E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 197 | 447 | 3.2E-66 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 763 | 984 | 1.0E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 138 | 196 | 3.3E-13 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 137 | 1.1E-25 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 666 | 762 | 5.3E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 448 | 628 | 3.6E-37 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 182 | 207 | 240.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 683 | 989 | 2.2E-29 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 422 | 446 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 85 | 109 | 72.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 492 | 516 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 231 | 255 | 7.9 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 540 | 564 | 32.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 302 | 326 | 160.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 683 | 989 | 37.290451 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 819 | 831 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 46 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_048495701.1 | receptor-like protein kinase HSL1 [Beta vulgaris subsp. vulgaris] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LBI9 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology