Basic Information
Locus ID:
gene_8126
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_12_Chr_6 | 35267097 | 35271164 | - | gene_8126 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.73 | 112,790.37 Da | 35.87 | 101.20 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 699 | 978 | 1.04433E-90 | - |
| Pfam | PF00560 | Leucine Rich Repeat | 122 | 144 | 1.2 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 220 | 279 | 1.7E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 69 | 2.5E-9 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 695 | 976 | 9.8E-46 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 681 | 978 | 3.78E-71 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 57 | 382 | 1.46E-53 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 394 | 597 | 2.04E-37 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 773 | 994 | 4.5E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 461 | 627 | 9.3E-40 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 210 | 460 | 1.1E-63 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 148 | 3.6E-28 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 676 | 772 | 1.7E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 149 | 209 | 1.0E-14 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 551 | 575 | 16.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 503 | 527 | 63.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 693 | 955 | 5.0E-26 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 242 | 266 | 34.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 433 | 457 | 210.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 96 | 120 | 55.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 693 | 984 | 35.608505 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 829 | 841 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_021739110.1 | receptor-like protein kinase HSL1 [Chenopodium quinoa] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LBI9 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology