Basic Information
Locus ID:
gene_8125
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_12_Chr_6 | 35263293 | 35265823 | - | gene_8125 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.65 | 78,806.85 Da | 47.44 | 92.15 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 391 | 674 | 2.33172E-94 | - |
| Pfam | PF13855 | Leucine rich repeat | 111 | 170 | 4.7E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 3 | 34 | 2.4E-7 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 387 | 671 | 8.1E-46 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 374 | 674 | 4.32E-72 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 13 | 301 | 8.16E-57 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 465 | 694 | 1.2E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 113 | 174 | 1.1E-18 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 369 | 464 | 2.0E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 112 | 4.0E-26 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 175 | 353 | 7.6E-40 | IPR032675 |
| SMART | SM00220 | serkin_6 | 385 | 673 | 1.3E-26 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 158 | 182 | 36.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 61 | 85 | 360.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 134 | 157 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 207 | 231 | 2.6 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 385 | 681 | 36.244537 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 524 | 536 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 391 | 415 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_021739112.1 | receptor-like protein kinase HSL1 [Chenopodium quinoa] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LBI7 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology