Basic Information
Locus ID:
gene_8076
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_12_Chr_6 | 34128786 | 34143776 | - | gene_8076 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.09 | 61,067.35 Da | 34.99 | 75.77 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05599 | STKc_NDR_like | 99 | 472 | 0.0 | - |
| Pfam | PF00433 | Protein kinase C terminal domain | 426 | 471 | 8.8E-5 | IPR017892 |
| Pfam | PF00069 | Protein kinase domain | 304 | 407 | 2.8E-19 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 102 | 250 | 8.1E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 86 | 455 | 1.31E-88 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 99 | 184 | 1.2E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 426 | 436 | 1.5E-41 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 185 | 250 | 1.2E-62 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 303 | 425 | 1.5E-41 | - |
| SMART | SM00133 | pkinase_C_6 | 408 | 473 | 6.4E-8 | IPR000961 |
| SMART | SM00220 | serkin_6 | 101 | 407 | 1.3E-102 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 408 | 481 | 12.699545 | IPR000961 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 101 | 407 | 46.166603 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 107 | 130 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 220 | 232 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33080.1 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. | 0 |
| RefSeq | XP_010669363.1 | serine/threonine-protein kinase 38 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9Y2H1 | Serine/threonine-protein kinase 38-like OS=Homo sapiens OX=9606 GN=STK38L PE=1 SV=3 | 0 | |
| TrEMBL | A0A0K9REH0 | Serine/threonine-protein kinase tricorner-like OS=Spinacia oleracea OX=3562 GN=SOVF_081930 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology