Basic Information
Locus ID:
gene_8015
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_12_Chr_6 | 32563976 | 32569840 | - | gene_8015 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.63 | 75,034.79 Da | 34.00 | 85.05 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 360 | 625 | 1.3E-30 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 130 | 189 | 1.4E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 78 | 2.8E-9 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 360 | 631 | 1.54E-47 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 45 | 238 | 6.8E-25 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 324 | 431 | 5.4E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 256 | 5.6E-39 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 432 | 651 | 2.9E-38 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 356 | 667 | 27.537991 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 316 | 331 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 630 | 667 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 646 | 667 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 278 | 293 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 278 | 331 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20190.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021843964.1 | pollen receptor-like kinase 4 [Spinacia oleracea] | 0 |
| Q9LJY0 | Pollen receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=PRK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803NCK5 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology