Basic Information
Locus ID:
gene_8013
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
proteinaceous RNase P 1, chloroplastic mitochondrial-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 11543241 | 11547550 | - | gene_8013 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.52 | 97,189.66 Da | 49.64 | 73.15 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 194 | 253 | 6.1E-16 | IPR033443 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 347 | 493 | 1.7E-55 | IPR033443 |
| Pfam | PF16953 | Protein-only RNase P | 534 | 760 | 1.4E-73 | IPR031595 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 345 | 763 | 1.3E-196 | IPR011990 |
| Gene3D | G3DSA:3.40.50.11980 | - | 552 | 726 | 1.3E-196 | - |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 406 | 440 | 9.689847 | IPR002885 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 261 | 285 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 315 | 334 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 306 | 337 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 770 | 818 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 789 | 818 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 122 | 145 | - | - |
| Coils | Coil | Coil | 111 | 131 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 0 |
| RefSeq | XP_052200335.1 | proteinaceous RNase P 1, chloroplastic/mitochondrial-like [Diospyros lotus] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6P4BGQ3 | ribonuclease P OS=Ziziphus jujuba OX=326968 GN=LOC107431770 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology