Basic Information
Locus ID:
gene_7985
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Short Name:
PRK1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_12_Chr_6 | 31901195 | 31905175 | - | gene_7985 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.49 | 70,304.41 Da | 40.09 | 82.60 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 345 | 603 | 3.4E-29 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 12 | 55 | 3.3E-12 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 107 | 167 | 2.2E-9 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 11 | 199 | 2.38E-30 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 345 | 606 | 6.23E-47 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 127 | 222 | 9.8E-23 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 417 | 619 | 2.2E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 13 | 126 | 2.4E-22 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 306 | 415 | 1.8E-17 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 341 | 617 | 25.276552 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 303 | 319 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 275 | 326 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35390.1 | Leucine-rich repeat protein kinase family protein. Encodes a member of the receptor-like kinase family of genes. In pollen tubes, it accumulates in the plasma membrane of the apical growing tip through the process of exocytosis. | 0 |
| RefSeq | XP_021715870.1 | pollen receptor-like kinase 1 [Chenopodium quinoa] | 0 |
| C0LGU0 | Pollen receptor-like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=PRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MET9 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology