Basic Information
Locus ID:
gene_7846
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
protein binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 2930227 | 2943811 | - | gene_7846 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.31 | 41,358.07 Da | 39.51 | 75.94 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14604 | Variant SH3 domain | 307 | 355 | 3.0E-11 | IPR001452 |
| Pfam | PF16746 | BAR domain of APPL family | 64 | 257 | 5.2E-8 | - |
| SUPERFAMILY | SSF50044 | SH3-domain | 299 | 360 | 8.01E-16 | IPR036028 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 46 | 257 | 2.62E-25 | IPR027267 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 300 | 359 | 2.2E-16 | - |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 44 | 273 | 2.0E-14 | IPR027267 |
| SMART | SM00326 | SH3_2 | 303 | 358 | 3.9E-13 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 300 | 359 | 19.279881 | IPR001452 |
| Coils | Coil | Coil | 243 | 263 | - | - |
| Coils | Coil | Coil | 219 | 239 | - | - |
| Coils | Coil | Coil | 192 | 212 | - | - |
| Coils | Coil | Coil | 148 | 168 | - | - |
| Coils | Coil | Coil | 1 | 21 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34660.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_022763193.1 | SH3 domain-containing protein 2-like [Durio zibethinus] | 0 |
| Q8VWF1 | SH3 domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=SH3P2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6P6AEE9 | SH3 domain-containing protein 2-like OS=Durio zibethinus OX=66656 GN=LOC111308824 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology