Basic Information
Locus ID:
gene_7746
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
(E 0.0) protein kinase family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_12_Chr_6 | 22794172 | 22813858 | - | gene_7746 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.53 | 129,394.67 Da | 49.47 | 71.28 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06410 | PB1_UP2 | 175 | 271 | 8.43006E-44 | - |
| CDD | cd13999 | STKc_MAP3K-like | 892 | 1149 | 1.3739E-112 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 888 | 1148 | 1.1E-62 | IPR001245 |
| Pfam | PF00564 | PB1 domain | 188 | 272 | 5.3E-20 | IPR000270 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 187 | 276 | 1.45E-21 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 875 | 1146 | 8.88E-78 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 974 | 1168 | 7.1E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 879 | 973 | 8.8E-26 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 190 | 273 | 7.3E-12 | - |
| SMART | SM00220 | serkin_6 | 886 | 1153 | 6.6E-60 | IPR000719 |
| SMART | SM00666 | PB1_new | 186 | 273 | 1.0E-31 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 886 | 1153 | 40.894623 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 892 | 917 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1011 | 1023 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 968 | 981 | 9.5E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1120 | 1142 | 9.5E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1076 | 1098 | 9.5E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1005 | 1023 | 9.5E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 424 | 459 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 563 | 597 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 563 | 599 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 648 | 690 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 462 | 476 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 654 | 668 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 424 | 484 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79570.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_010693405.1 | uncharacterized protein LOC104906362 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9Q7Z2 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_209860 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology