Basic Information
Locus ID:
gene_7383
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_12_Chr_6 | 5418003 | 5423578 | - | gene_7383 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.95 | 78,300.11 Da | 47.15 | 82.81 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 370 | 664 | 5.75411E-131 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 339 | 650 | 2.1E-94 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 370 | 676 | 1.15E-71 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 372 | 671 | 2.5E-45 | IPR029044 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 90 | 137 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 90 | 119 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 120 | 137 | - | - |
| Coils | Coil | Coil | 249 | 269 | - | - |
| Coils | Coil | Coil | 301 | 321 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47780.1 | galacturonosyltransferase 4. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | XP_021724647.1 | probable galacturonosyltransferase 4 [Chenopodium quinoa] | 0 |
| Q93ZX7 | Probable galacturonosyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=GAUT4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7C9ES90 | Hexosyltransferase OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology