Basic Information
Locus ID:
gene_7357
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
At4g29660-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 79892995 | 79895087 | + | gene_7357 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.89 | 10,661.26 Da | 28.49 | 105.06 | 0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G29660.1 | embryo defective 2752. | 0 |
| RefSeq | XP_021749577.1 | uncharacterized protein At4g29660-like [Chenopodium quinoa] | 0 |
| Q94K18 | Uncharacterized protein At4g29660 OS=Arabidopsis thaliana OX=3702 GN=EMB2752 PE=4 SV=1 | 0 | |
| TrEMBL | A0A803N2N7 | Embryo defective protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg4245 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_15197 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah035416 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_2g026070 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg21176 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg16515 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00016290 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl62605, Sgl67152 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000018493, gene:ENSEOMG00000019613 ... |
| Amaranthaceae | Chenopodium quinoa | 4 | CQ.Regalona.r1.1BG0018160, CQ.Regalona.r1.2AG0019950 ... |
| Apiaceae | Apium graveolens | 1 | Ag10G01463 |
| Arecaceae | Cocos nucifera | 1 | COCNU_13G003920 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103711989 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_01.3294.V1.1, AsparagusV1_01.423.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri8G14196 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT4G29660.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10026646m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp3g29900.v2.2, Sp7g27450.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB05g008010.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq06G0864 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl06G0893 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno12g01190 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate06g15850 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-12021 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG07.1226 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00039649 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb1G03525, Lb2G13127 |
| Poaceae | Echinochloa crus-galli | 3 | AH05.1584, BH05.1738, CH04.2146 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_5AG0365050, gene-QOZ80_5BG0412930 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.1HG0080600.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_016286 |
| Poaceae | Oryza coarctata | 2 | Oco09G015470, Oco10G015360 |
| Poaceae | Oryza sativa | 1 | LOC_Os05g46280.1 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0503887, Pt_Chr0503905 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr01G014810, Chr12G022110, Chr18G015190, Chr22G002530 |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G586600 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC1AG053150, gene_TRIDC1BG060800 |
| Poaceae | Triticum aestivum | 3 | TraesCS1A02G361300.1, TraesCS1B02G377900.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb294300_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-13804 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g27296 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG10.500 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc09g09960 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_4_RagTag.1842 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-25740 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-5083 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-4628 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000008l.1045 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00000899 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-14838 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-1138 |
| Salicaceae | Populus euphratica | 1 | populus_peu29519 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132636868 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107005310 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_7357 |
| Tamaricaceae | Tamarix chinensis | 1 | TC10G1733 |