Basic Information
Locus ID:
gene_7272
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Belongs to the ATG8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_12_Chr_6 | 3123071 | 3127133 | - | gene_7272 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.73 | 17,886.69 Da | 41.66 | 94.90 | -0.10 |
Protein Domain:
KEGG Pathway
Pathway:
ko04068 (FoxO signaling pathway)
map04068 (FoxO signaling pathway)
ko04136 (Autophagy - other)
map04136 (Autophagy - other)
ko04137 (Mitophagy - animal)
map04137 (Mitophagy - animal)
ko04138 (Autophagy - yeast)
map04138 (Autophagy - yeast)
ko04139 (Mitophagy - yeast)
map04139 (Mitophagy - yeast)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04212 (Longevity regulating pathway - worm)
map04212 (Longevity regulating pathway - worm)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
map04621 (NOD-like receptor signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G05630.1 | Ubiquitin-like superfamily protein. in the Arabidopsis autophagy pathway | 0 |
| RefSeq | XP_021755739.1 | autophagy-related protein 8C [Chenopodium quinoa] | 0 |
| M1C146 | Autophagy-related protein 8C-like OS=Solanum tuberosum OX=4113 GN=ATG8CL PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QZV3 | Autophagy-related protein OS=Spinacia oleracea OX=3562 GN=SOVF_122750 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology