Basic Information
Locus ID:
gene_7202
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
WD40-like Beta Propeller Repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_12_Chr_6 | 2050110 | 2053485 | - | gene_7202 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.27 | 82,097.71 Da | 32.77 | 77.27 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 625 | 643 | 0.029 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 191 | 213 | 0.054 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 568 | 588 | 0.041 | IPR011659 |
| SUPERFAMILY | SSF82171 | DPP6 N-terminal domain-like | 142 | 674 | 2.49E-23 | - |
| Gene3D | G3DSA:2.120.10.30 | - | 141 | 258 | 3.6E-7 | IPR011042 |
| Gene3D | G3DSA:2.120.10.30 | - | 423 | 653 | 7.9E-22 | IPR011042 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21680.1 | DPP6 N-terminal domain-like protein. | 0 |
| RefSeq | XP_002524154.1 | uncharacterized protein LOC8274801 [Ricinus communis] | 0 |
| TrEMBL | A0A2P5AEY0 | Tricorn protease OS=Parasponia andersonii OX=3476 GN=PanWU01x14_339100 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology