Basic Information
Locus ID:
gene_7201
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
WD40-like Beta Propeller Repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_12_Chr_6 | 2003530 | 2011758 | - | gene_7201 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.29 | 58,057.97 Da | 31.44 | 79.88 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 426 | 444 | 0.019 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 369 | 389 | 0.027 | IPR011659 |
| SUPERFAMILY | SSF82171 | DPP6 N-terminal domain-like | 207 | 475 | 9.03E-20 | - |
| Gene3D | G3DSA:2.120.10.30 | - | 187 | 346 | 2.2E-7 | IPR011042 |
| Gene3D | G3DSA:2.120.10.30 | - | 347 | 466 | 9.2E-13 | IPR011042 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21680.1 | DPP6 N-terminal domain-like protein. | 0 |
| RefSeq | XP_021640822.1 | uncharacterized protein LOC110635701 isoform X1 [Hevea brasiliensis] | 0 |
| TrEMBL | A0A6A6M1I4 | Protein TolB OS=Hevea brasiliensis OX=3981 GN=GH714_029688 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology