Basic Information
Locus ID:
gene_7199
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
WD40-like Beta Propeller Repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_12_Chr_6 | 1938562 | 1945878 | - | gene_7199 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.41 | 78,529.63 Da | 29.74 | 74.81 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 400 | 412 | 0.11 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 178 | 210 | 0.013 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 533 | 562 | 5.0E-4 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 604 | 622 | 0.0032 | IPR011659 |
| SUPERFAMILY | SSF82171 | DPP6 N-terminal domain-like | 144 | 652 | 2.51E-25 | - |
| Gene3D | G3DSA:2.120.10.30 | - | 143 | 319 | 1.2E-7 | IPR011042 |
| Gene3D | G3DSA:2.120.10.30 | - | 413 | 687 | 3.8E-26 | IPR011042 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21670.1 | 0 | |
| RefSeq | XP_010102639.1 | uncharacterized protein LOC21394211 [Morus notabilis] | 0 |
| TrEMBL | W9RRW0 | Peptidase_S9 domain-containing protein OS=Morus notabilis OX=981085 GN=L484_010931 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology