Basic Information
Locus ID:
gene_7198
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
WD40-like Beta Propeller Repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_12_Chr_6 | 1906673 | 1912506 | - | gene_7198 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.82 | 84,471.84 Da | 38.71 | 72.33 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 505 | 536 | 2.7E-4 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 576 | 590 | 0.0022 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 185 | 216 | 0.063 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 415 | 427 | 0.054 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 636 | 649 | 0.14 | IPR011659 |
| SUPERFAMILY | SSF82171 | DPP6 N-terminal domain-like | 162 | 651 | 2.62E-25 | - |
| Gene3D | G3DSA:2.120.10.30 | - | 391 | 650 | 1.4E-23 | IPR011042 |
| Gene3D | G3DSA:2.120.10.30 | - | 138 | 325 | 1.8E-6 | IPR011042 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21680.1 | DPP6 N-terminal domain-like protein. | 0 |
| RefSeq | XP_002524154.1 | uncharacterized protein LOC8274801 [Ricinus communis] | 0 |
| TrEMBL | B9SDT5 | Peptidase_S9 domain-containing protein OS=Ricinus communis OX=3988 GN=RCOM_1711490 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology