Basic Information
Locus ID:
gene_7196
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
WD40-like Beta Propeller Repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_12_Chr_6 | 1884193 | 1887961 | - | gene_7196 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 80,963.04 Da | 30.60 | 69.07 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 410 | 422 | 0.11 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 617 | 633 | 0.0052 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 544 | 572 | 0.0012 | IPR011659 |
| SUPERFAMILY | SSF82171 | DPP6 N-terminal domain-like | 147 | 632 | 1.73E-22 | - |
| Gene3D | G3DSA:2.120.10.30 | - | 423 | 644 | 1.4E-24 | IPR011042 |
| Gene3D | G3DSA:2.120.10.30 | - | 146 | 321 | 2.8E-7 | IPR011042 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21670.1 | 0 | |
| RefSeq | XP_002524154.1 | uncharacterized protein LOC8274801 [Ricinus communis] | 0 |
| TrEMBL | B9SDT5 | Peptidase_S9 domain-containing protein OS=Ricinus communis OX=3988 GN=RCOM_1711490 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology